Asedb database
Web1 mar 2001 · Summary: The Alanine Scanning Energetics database (ASEdb) is a searchable database of single alanine mutations in protein–protein, protein–nucleic acid, … WebAbbreviation Variation. ASEdb (3 times) Long Form Variation. Alanine Scanning Energetics database (2 times) Alanine Scanning Energetics Database (1 time) Pair (Abbreviation/Long Form) Variation.
Asedb database
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Web9 ago 2008 · Alanine scanning data was extracted from ASEdb database (Thorn and Bogan, 2001 ). For each complex we recorded the name of the mutated partner, the … Web12 dic 2012 · Owing to the high cost and low efficiency of this traditional experimental method, public databases of experimental results such as the Alanine Scanning Energetics Database (ASEdb) [ 13] and the Binding Interface Database (BID) [ 14] contain only a limited number of complexes.
WebKBA , BC-SYB-ASE , Sybase ASE Database Platform (non Business Suite) , Product Enhancement . About this page This is a preview of a SAP Knowledge Base Article. Click more to access the full version on SAP for Me (Login … WebThe Alanine Scanning Energetics database (ASEdb) is a searchable database of single alanine mutations in protein-protein, protein-nucleic acid, and protein-small molecule …
Web12 lug 2016 · In this study, ASEdb is used as training data and BID database is used as independent test set. For all dataset, CATH query system was used to eliminate the redundancy in the data set. The sequence identity less than 35 % and the SSAP score less than or equal to 80 is deemed to redundancy. 15 protein complexes without redundancy … WebASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions.
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Web1 apr 2001 · The Alanine Scanning Energetics database (ASEdb) is a searchable database of single alanine mutations in protein–protein, protein–nucleic acid, and protein–small … closest walking trail to my locationWeb16 gen 2008 · The ASEdb database contains 101 experiments extracted from 74 publications that are available online . There were 3,010 residue mutations recorded. … closest walking trailhttp://allie.dbcls.jp/pair/ASEdb;Alanine+Scanning+Energetics+database.html closest walking park near meWeb1 dic 2010 · The enhanced scoring functions were first evaluated on 275 mutated residues selected from the ASEdb database to reveal the Pearson correlations between ddG values and predicted energies. The 3D-interologs method applied four scoring functions (Fig. 5 ), including 3D- interologs (red), 3D-partner (blue), E sim (only template similarity, green) … closest walmart supercenter near me zip codeWeb12 lug 2016 · AAindex1 is a database containing 544 physicochemical and biochemical properties for 20 types of amino acids. Since high related properties change the predictive results, relevant ones with a correlation coefficient more than 0.6 are removed like Chen’s method [ 15 ], as did in AAindex1 itself. closest walmart neighborhood marketWeb15 ago 2008 · Here, we applied SNAP to all experimental mutations in the ASEdb database of alanine scans; we identified 70% of the hot spots (≥1 kCal/mol change in binding energy); more severe changes were predicted more accurately. Encouraged, we carried out a complete all-against-all in silico mutagenesis for human glucokinase. closest walmart to wewahitchka flWebby in vitro experiments and reported in the ASEdb database. Motivated by these works, other energy-based methods have been proposed in [7] [8]. Other computational approaches also closest walmart to carrabelle florida